Desulfurization Activated Phosphorothioate DNAzyme for the Detection of Thallium
| dc.contributor.author | Huang, Po-Jung Jimmy | |
| dc.contributor.author | Vazin, Mahsa | |
| dc.contributor.author | Liu, Juewen | |
| dc.date.accessioned | 2017-02-23T20:21:05Z | |
| dc.date.available | 2017-02-23T20:21:05Z | |
| dc.date.issued | 2015-10-20 | |
| dc.description | This document is the Accepted Manuscript version of a Published Work that appeared in final form in Analytical Chemistry, copyright © American Chemical Society after peer review and technical editing by publisher. To access the final edited and published work see Huang, P.-J. J., Vazin, M., & Liu, J. (2015). Desulfurization Activated Phosphorothioate DNAzyme for the Detection of Thallium. Analytical Chemistry, 87(20), 10443–10449. https://doi.org/10.1021/acs.analchem.5b02568 | en |
| dc.description.abstract | Thallium (Tl) is a highly toxic heavy metal situated between mercury and lead in the periodic table. While its neighbors have been thoroughly studied for DNA-based sensing, little is known about thallium detection. In this work, in vitro selection of RNA-cleaving DNAzymes is carried out using Tl3+ as the target metal cofactor. Both normal DNA and phosphorothioate (PS)-modified DNA are tested for this purpose. While no Tl3+-dependent DNAzymes are obtained, a DNA oligonucleotide containing a single PS-modified RNA nucleotide is found to cleave by ∼7% by Tl3+ at the RNA position. The remaining 93% are desulfurized. By hybridization of this PS-modified oligonucleotide with the Tm7 DNAzyme, the cleavage yield increases to ∼40% in the presence of Tl3+ and Er3+. Tm7 is an Er3+-dependent RNA-cleaving DNAzyme. It cleaves only the normal substrate but is completely inactive using the PS-modified substrate. Tl3+ desulfurizes the PS substrate to the normal substrate to be cleaved by Tm7 and Er3+. This system is engineered into a catalytic beacon for Tl3+ with a detection limit of 1.5 nM, which is below its maximal contamination limit defined by the U.S. Environmental Protection Agency (10 nM). | en |
| dc.description.sponsorship | Natural Sciences and Engineering Research Council ||Discovery Grant: 386326 and Strategic Project Grant: STPGP-447472-2013 055766 | en |
| dc.identifier.uri | http://dx.doi.org/10.1021/acs.analchem.5b02568 | |
| dc.identifier.uri | http://hdl.handle.net/10012/11342 | |
| dc.language.iso | en | en |
| dc.publisher | American Chemical Society | en |
| dc.relation.uri | 10.1021/acs.anal- chem.5b02568 . | en |
| dc.subject | DNAzymes | en |
| dc.subject | Desulfurization | en |
| dc.subject | Thallium | en |
| dc.title | Desulfurization Activated Phosphorothioate DNAzyme for the Detection of Thallium | en |
| dc.type | Article | en |
| dcterms.bibliographicCitation | Huang, P.-J. J., Vazin, M., & Liu, J. (2015). Desulfurization Activated Phosphorothioate DNAzyme for the Detection of Thallium. Analytical Chemistry, 87(20), 10443–10449. https://doi.org/10.1021/acs.analchem.5b02568 | en |
| uws.contributor.affiliation1 | Faculty of Science | en |
| uws.contributor.affiliation2 | Chemistry | en |
| uws.contributor.affiliation2 | Waterloo Institute for Nanotechnology (WIN) | en |
| uws.peerReviewStatus | Reviewed | en |
| uws.scholarLevel | Faculty | en |
| uws.typeOfResource | Text | en |